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Publications

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2016

E De Schutter:
Neuroinformatics for Degenerate Brains. Neuroinformatics 14(1):1-3 (2016)

R Pulizzi, G Musumeci, C Van den Haute, S Van De Vijver, V Baekelandt, M Giugliano:
Brief wide-field photostimuli evoke and modulate oscillatory reverberating activity in cortical networks. Scientific reports 6:24701 (2016)

I Segura, C Lange, E Knevels, A Moskalyuk, R Pulizzi, G Eelen, T Chaze, C Tudor, C Boulegue, M Holt, D Daelemans, M Matondo, B Ghesquière, M Giugliano, C Ruiz de Almodovar, M Dewerchin, P Carmeliet:
The Oxygen Sensor PHD2 Controls Dendritic Spines and Synapses via Modification of Filamin A. Cell reports 14(11):2653-67 (2016)

I Hepburn, W Chen, E De Schutter:
Accurate reaction-diffusion operator splitting on tetrahedral meshes for parallel stochastic molecular simulations. The Journal of chemical physics 145(5):054118 (2016)

S Hong, M Negrello, M Junker, A Smilgin, P Thier, E De Schutter:
Multiplexed coding by cerebellar Purkinje neurons. eLife 5:HASH(0x100a08568) (2016)


2015

SK Sudhakar, B Torben-Nielsen, E De Schutter:
Cerebellar Nuclear Neurons Use Time and Rate Coding to Transmit Purkinje Neuron Pauses. PLoS computational biology 11(12):e1004641 (2015)

S Huang, S Hong, E De Schutter:
Non-linear leak currents affect mammalian neuron physiology. Frontiers in cellular neuroscience 9:432 (2015)

J Myung, S Hong, D DeWoskin, E De Schutter, DB Forger, T Takumi:
GABA-mediated repulsive coupling between circadian clock neurons in the SCN encodes seasonal time. Proceedings of the National Academy of Sciences of the United States of America 112(29):E3920-9 (2015)

E De Schutter:
The missing piece of the puzzle: neuroinformatics at the bench. Neuroinformatics 13(2):131-2 (2015)

P Warnaar, J Couto, M Negrello, M Junker, A Smilgin, A Ignashchenkova, M Giugliano, P Thier, E De Schutter:
Duration of Purkinje cell complex spikes increases with their firing frequency. Frontiers in cellular neuroscience 9:122 (2015)

J Couto, D Linaro, E De Schutter, M Giugliano:
On the firing rate dependency of the phase response curve of rat Purkinje neurons in vitro. PLoS computational biology 11(3):e1004112 (2015)

W Peelaerts, L Bousset, A Van der Perren, A Moskalyuk, R Pulizzi, M Giugliano, C Van den Haute, R Melki, V Baekelandt:
α-Synuclein strains cause distinct synucleinopathies after local and systemic administration. Nature 522(7556):340-4 (2015)


2014

E Vasilaki, M Giugliano:
Emergence of connectivity motifs in networks of model neurons with short- and long-term plastic synapses. PloS one 9(1):e84626 (2014)

M Mahmud, R Pulizzi, E Vasilaki, M Giugliano:
QSpike tools: a generic framework for parallel batch preprocessing of extracellular neuronal signals recorded by substrate microelectrode arrays. Frontiers in neuroinformatics 8:26 (2014)

B Torben-Nielsen, E De Schutter:
Context-aware modeling of neuronal morphologies. Frontiers in neuroanatomy 8:92 (2014)

H Anwar, CJ Roome, H Nedelescu, W Chen, B Kuhn, E De Schutter:
Dendritic diameters affect the spatial variability of intracellular calcium dynamics in computer models. Frontiers in cellular neuroscience 8:168 (2014)

W Chen, E De Schutter:
Python-based geometry preparation and simulation visualization toolkits for STEPS. Frontiers in neuroinformatics 8:37 (2014)

E De Schutter:
The dangers of plug-and-play simulation using shared models. Neuroinformatics 12(2):227-8 (2014)


2013

S Ratte, S Hong, E De Schutter, SA Prescott:
Impact of neuronal properties on network coding: roles of spike initiation dynamics and robust synchrony transfer. Neuron 78(5):758-72 (2013)

E De Schutter:
Collaborative modeling in neuroscience: time to go open model? Neuroinformatics 11(2):135-6 (2013)

MR Diaz, A Wadleigh, S Kumar, E De Schutter, CF Valenzuela:
Na+/K+-ATPase inhibition partially mimics the ethanol-induced increase of the Golgi cell-dependent component of the tonic GABAergic current in rat cerebellar granule cells. PloS one 8(1):e55673 (2013)

H Anwar, I Hepburn, H Nedelescu, W Chen, E De Schutter:
Stochastic Calcium Mechanisms Cause Dendritic Calcium Spike Variability. The Journal of neuroscience : the official journal of the Society for Neuroscience 33(40):15848-15867 (2013)

I Hepburn, R Cannon, E De Schutter:
Efficient calculation of the quasi-static electrical potential on a tetrahedral mesh and its implementation in STEPS. Frontiers in computational neuroscience 7:129 (2013)

CM Simon, I Hepburn, W Chen, E De Schutter:
The role of dendritic spine morphology in the compartmentalization and delivery of surface receptors. Journal of computational neuroscience 1: (2013)

K Veys, D Snyders, E De Schutter:
Kv3.3b expression defines the shape of the complex spike in the Purkinje cell. Frontiers in cellular neuroscience 7:205 (2013)


2012

S Hong, S Ratte, SA Prescott, E De Schutter:
Single neuron firing properties impact correlation-based population coding. The Journal of neuroscience : the official journal of the Society for Neuroscience 32(4):1413-28 (2012)

I Raikov, E De Schutter:
The promise and shortcomings of XML as an interchange format for computational models of biology. Neuroinformatics 10(1):1-3 (2012)

I Hepburn, W Chen, S Wils, E De Schutter:
STEPS: efficient simulation of stochastic reaction-diffusion models in realistic morphologies. BMC systems biology 6(1):36 (2012)

P Botta, FM Simoes de Souza, T Sangrey, E De Schutter, CF Valenzuela:
Excitation of rat cerebellar Golgi cells by ethanol: further characterization of the mechanism. Alcoholism, clinical and experimental research 36(4):616-24 (2012)

Y Kim, R Sinclair, N Chindapol, JA Kaandorp, E De Schutter:
Geometric theory predicts bifurcations in minimal wiring cost trees in biology are flat. PLoS computational biology 8(4):e1002474 (2012)

I Raikov, E De Schutter:
The layer-oriented approach to declarative languages for biological modeling. PLoS computational biology 8(5):e1002521 (2012)

G Antunes, E De Schutter:
A stochastic signaling network mediates the probabilistic induction of cerebellar long-term depression. The Journal of neuroscience : the official journal of the Society for Neuroscience 32(27):9288-300 (2012)

J Myung, S Hong, F Hatanaka, Y Nakajima, E De Schutter, T Takumi:
Period coding of Bmal1 oscillators in the suprachiasmatic nucleus. The Journal of neuroscience : the official journal of the Society for Neuroscience 32(26):8900-18 (2012)

K Veys, AJ Labro, E De Schutter, DJ Snyders:
Quantitative single-cell ion-channel gene expression profiling through an improved qRT-PCR technique combined with whole cell patch clamp. Journal of neuroscience methods 209(1):227-34 (2012)

S Hong, Q Robberechts, E De Schutter:
Efficient Estimation of Phase Response Curves via Compressive Sensing. Journal of neurophysiology -: (2012)

E De Schutter, GA Ascoli, DN Kennedy:
Ten years of neuroinformatics. Neuroinformatics 10(4):329-30 (2012)

E De Schutter:
The importance of stochastic signaling processes in the induction of long-term synaptic plasticity. Neural networks : the official journal of the International Neural Network Society 314:314 (2012)

M Mahmud, MM Rahman, S Vassanelli:
Na+ channels at postsynaptic muscle membrane affects synaptic transmission at neuromuscular junction: a simulation study. Conference proceedings : ... Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Conference 2012:3616-9 (2012)

MM Rahman, M Mahmud:
Neuromuscular Junction Transmission is Effected by Quantum Entanglement of Ion Transition States. Biomedizinische Technik. Biomedical engineering 57 Suppl 1:HASH(0x18dd018) (2012)

M Mahmud, MM Rahman, D Travalin, P Raif, A Hussain:
Service oriented architecture based web application model for collaborative biomedical signal analysis. Biomedizinische Technik. Biomedical engineering 57 Suppl 1:HASH(0x18dee18) (2012)

M Mahmud, A Bertoldo, S Girardi, M Maschietto, S Vassanelli:
SigMate: a Matlab-based automated tool for extracellular neuronal signal processing and analysis. Journal of neuroscience methods 207(1):97-112 (2012)


2011

V Steuber, NW Schultheiss, RA Silver, E De Schutter, D Jaeger:
Determinants of synaptic integration and heterogeneity in rebound firing explored with data-driven models of deep cerebellar nucleus cells. Journal of computational neuroscience 30(3):633-58 (2011)

K Tahon, M Wijnants, E De Schutter, R Maex:
CURRENT SOURCE DENSITY CORRELATES OF CEREBELLAR GOLGI AND PURKINJE CELL RESPONSES TO TACTILE INPUT. Journal of neurophysiology 105:1327-1341 (2011)

F M Simoes de Souza, E De Schutter :
Robustness effect of gap junctions between Golgi cells on cerebellar cortex oscillations Neural Systems 1:7 (2011)

A Kunze, M Giugliano, A Valero, P Renaud:
Micropatterning neural cell cultures in 3D with a multi-layered scaffold. Biomaterials 32(8):2088-98 (2011)

D Linaro, M Storace, M Giugliano:
Accurate and fast simulation of channel noise in conductance-based model neurons by diffusion approximation. PLoS computational biology 7(3):e1001102 (2011)

K Fuchsberger, A Le Goff, L Gambazzi, FM Toma, A Goldoni, M Giugliano, M Stelzle, M Prato:
Multiwalled carbon-nanotube-functionalized microelectrode arrays fabricated by microcontact printing: platform for studying chemical and electrical neuronal signaling. Small (Weinheim an der Bergstrasse, Germany) 7(4):524-30 (2011)

M Uusisaari, E De Schutter:
The mysterious microcircuitry of the cerebellar nuclei. The Journal of physiology 589(Pt 14):3441-57 (2011)

F Santamaria, S Wils, E De Schutter, GJ Augustine:
The diffusional properties of dendrites depend on the density of dendritic spines. The European journal of neuroscience 1:0 (2011)

K Tahon, M Wijnants, E De Schutter:
The RAT-ROTADRUM: A reaction time task depending on a continuous stream of tactile sensory information to the rat. Journal of neuroscience methods 1:0 (2011)

G Testa-Silva, A Loebel, M Giugliano, CP de Kock, HD Mansvelder, RM Meredith:
Hyperconnectivity and Slow Synapses during Early Development of Medial Prefrontal Cortex in a Mouse Model for Mental Retardation and Autism. Cerebral cortex (New York, N.Y. : 1991) :HASH(0x18e11b4) (2011)

P Richmond, L Buesing, M Giugliano, E Vasilaki:
Democratic population decisions result in robust policy-gradient learning: a parametric study with GPU simulations. PloS one 6(5):e18539 (2011)

Giugliano, M.:
neuronanotecnologie In Dizionario della Mente - Enciclopedia Treccani (Parisi, V. editor) 1: (2011)

A Bacci, M Giugliano:
Use of dynamic-clamp as a tool to reveal the computational properties of single neurons embedded in cortical circuits. In Neuronal Network Analysis (Fellin, T., and Halassa, M.) Springer Protocols series 67:149-171 (2011)

MM Rahman, M Mahmud, S Vassanelli:
Effect of self-gating on action potential firing at neuromuscular junction. Conference proceedings : ... Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Conference 2011:4082-5 (2011)

M Mahmud, S Girardi, M Maschietto, E Pasqualotto, S Vassanelli:
An automated method to determine angular preferentiality using LFPs recorded from rat barrel cortex by brain-chip interface under mechanical whisker stimulation. Conference proceedings : ... Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Conference 2011:2307-10 (2011)

M Mahmud, E Pasqualotto, A Bertoldo, S Girardi, M Maschietto, S Vassanelli:
An automated method for detection of layer activation order in information processing pathway of rat barrel cortex under mechanical whisker stimulation. Journal of neuroscience methods 196(1):141-50 (2011)


2010

P Botta, FM de Souza, T Sangrey, E De Schutter, CF Valenzuela:
Alcohol Excites Cerebellar Golgi Cells by Inhibiting the Na(+)/K(+) ATPase. Neuropsychopharmacology : official publication of the American College of Neuropsychopharmacology 35:1984-96 (2010)

E De Schutter:
Data publishing and scientific journals: the future of the scientific paper in a world of shared data. Neuroinformatics 8:151-3 (2010)

Q Robberechts, M Wijnants, M Giugliano, E De Schutter:
Long-term depression at parallel fiber to Golgi cell synapses. Journal of neurophysiology 104(6):3413-23 (2010)

H Anwar, S Hong, E De Schutter:
Controlling Ca(2+)-Activated K (+) Channels with Models of Ca (2+) Buffering in Purkinje Cells. Cerebellum (London, England) 1:0 (2010)

AE Talpalar, M Giugliano, Y Grossman:
Enduring medial perforant path short-term synaptic depression at high pressure. Frontiers in cellular neuroscience 4:128 (2010)

L Gambazzi, O Gokce, T Seredenina, E Katsyuba, H Runne, H Markram, M Giugliano, R Luthi-Carter:
Diminished activity-dependent brain-derived neurotrophic factor expression underlies cortical neuron microcircuit hypoconnectivity resulting from exposure to mutant huntingtin fragments. The Journal of pharmacology and experimental therapeutics 335(1):13-22 (2010)

M Mahmud, A Bertoldo, M Maschietto, S Girardi, S Vassanelli:
Automatic detection of layer activation order in information processing pathways of rat barrel cortex under mechanical whisker stimulation. Conference proceedings : ... Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Conference 2010:6095-8 (2010)

M Mahmud, A Bertoldo, S Girardi, M Maschietto, S Vassanelli:
SigMate: A MATLAB-based neuronal signal processing tool. Conference proceedings : ... Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Conference 2010:1352-5 (2010)


2009

E De Schutter, V Steuber:
Patterns and Pauses in Purkinje Cell Simple Spike Trains: Experiments, Modeling and Theory. Neuroscience 162:816-826 (2009)

E De Schutter:
The International Neuroinformatics Coordinating Facility: evaluating the first years. Neuroinformatics 7:161-3 (2009)

S Wils, E De Schutter:
STEPS: Modeling and Simulating Complex Reaction-Diffusion Systems with Python. Frontiers in neuroinformatics 3:15 (2009)

F Gheysen, W Gevers, E De Schutter, H Van Waelvelde, W Fias:
Disentangling perceptual from motor implicit sequence learning with a serial color-matching task. Experimental brain research. Experimentelle Hirnforschung. 197:163-74 (2009)

Erik De Schutter (Editor):
Computational Modeling Methods for Neuroscientists MIT Press, Cambridge, MA, USA -: (2009)

M Giugliano:
Calcium waves in astrocyte networks: theory and experiments. Frontiers in neuroscience 3(2):160-1 (2009)

S Gawad, M Giugliano, M Heuschkel, B Wessling, H Markram, U Schnakenberg, P Renaud, H Morgan:
Substrate arrays of iridium oxide microelectrodes for in vitro neuronal interfacing. Frontiers in neuroengineering 2:1 (2009)

G Cellot, E Cilia, S Cipollone, V Rancic, A Sucapane, S Giordani, L Gambazzi, H Markram, M Grandolfo, D Scaini, F Gelain, L Casalis, M Prato, M Giugliano, L Ballerini:
Carbon nanotubes might improve neuronal performance by favouring electrical shortcuts. Nature nanotechnology 4(2):126-33 (2009)


2008

E De Schutter:
Why are computational neuroscience and systems biology so separate? PLoS computational biology 4:e1000078 (2008)

E De Schutter:
Reviewing multi-disciplinary papers: a challenge in neuroscience? Neuroinformatics 6:253-5 (2008)

S Hong, E De Schutter:
Purkinje neurons: What is the signal for complex spikes? Current biology : CB 18:R969-71 (2008)

W Van Geit, E De Schutter, P Achard:
Automated neuron model optimization techniques: a review. Biological cybernetics 99:241-51 (2008)

P Achard, E De Schutter:
Calcium, synaptic plasticity and intrinsic homeostasis in purkinje neuron models. Frontiers in computational neuroscience 2:8 (2008)

M Giugliano, G La Camera, S Fusi, W Senn:
The response of cortical neurons to in vivo-like input current: theory and experiment: II. Time-varying and spatially distributed inputs. Biological cybernetics 99(4-5):303-18 (2008)

G La Camera, M Giugliano, W Senn, S Fusi:
The response of cortical neurons to in vivo-like input current: theory and experiment : I. Noisy inputs with stationary statistics. Biological cybernetics 99(4-5):279-301 (2008)


2007

E De Schutter:
Neuroscience leading the way: reviews cascade by the INCF. Neuroinformatics 5:205-6 (2007)

W Van Geit, P Achard, E De Schutter:
Neurofitter: a parameter tuning package for a wide range of electrophysiological neuron models. Frontiers in neuroinformatics 1:1 (2007)

SL Shin, FE Hoebeek, M Schonewille, CI De Zeeuw, A Aertsen, E De Schutter:
Regular patterns in cerebellar Purkinje cell simple spike trains. PLoS ONE 2:e485 (2007)

V Steuber, W Mittmann, FE Hoebeek, RA Silver, CI De Zeeuw, M Häusser, E De Schutter:
Cerebellar LTD and pattern recognition by Purkinje cells. Neuron 54:121-36 (2007)

RC Cannon, MO Gewaltig, P Gleeson, US Bhalla, H Cornelis, ML Hines, FW Howell, E Muller, JR Stiles, S Wils, E De Schutter:
Interoperability of neuroscience modeling software: current status and future directions. Neuroinformatics 5:127-38 (2007)

SL Shin, S Rotter, A Aertsen, E De Schutter:
Stochastic description of complex and simple spike firing in cerebellar Purkinje cells. The European journal of neuroscience 25:785-94 (2007)

S Solinas, L Forti, E Cesana, J Mapelli, E De Schutter, E D'Angelo:
Fast-Reset of Pacemaking and Theta-Frequency Resonance Patterns in Cerebellar Golgi Cells: Simulations of their Impact In Vivo. Frontiers in cellular neuroscience 1:4 (2007)

S Solinas, L Forti, E Cesana, J Mapelli, E De Schutter, E D'Angelo:
Computational reconstruction of pacemaking and intrinsic electroresponsiveness in cerebellar Golgi cells. Frontiers in cellular neuroscience 1:2 (2007)

E. De Schutter:
A Second Look Back (editorial). Neuroinformatics 5:1-2 (2007)

H. Cornelis, E. De Schutter:
Towards automated model partitioning for parallel computers. Neurocomputing 70:2117-2121 (2007)


2006

TB Leergaard, S Lillehaug, E De Schutter, JM Bower, JG Bjaalie:
Topographical organization of pathways from somatosensory cortex through the pontine nuclei to tactile regions of the rat cerebellar hemispheres. The European journal of neuroscience 24:2801-12 (2006)

F Santamaria, S Wils, E De Schutter, GJ Augustine:
Anomalous diffusion in Purkinje cell dendrites caused by spines. Neuron 52:635-48 (2006)

SL Shin, E De Schutter:
Dynamic synchronization of Purkinje cell simple spikes. Journal of neurophysiology 96:3485-91 (2006)

E De Schutter, GA Ascoli, DN Kennedy:
On the future of the human brain project. Neuroinformatics 4:129-30 (2006)

P Achard, E De Schutter:
Complex parameter landscape for a complex neuron model. PLoS computational biology 2:e94 (2006)

UG Hofmann, A Folkers, F Mösch, T Malina, KM Menne, G Biella, P Fagerstedt, E De Schutter, W Jensen, K Yoshida, D Hoehl, U Thomas, MG Kindlundh, P Norlin, M de Curtis:
A novel high channel-count system for acute multisite neuronal recordings. IEEE transactions on bio-medical engineering 53:1672-7 (2006)

SM Solinas, R Maex, E De Schutter:
Dendritic amplification of inhibitory postsynaptic potentials in a model Purkinje cell. The European journal of neuroscience 23:1207-18 (2006)


2005

K Tahon, A Volny-Luraghi, E De Schutter:
Temporal characteristics of tactile stimuli influence the response profile of cerebellar Golgi cells. Neuroscience letters 390:156-61 (2005)

SK Koekkoek, K Yamaguchi, BA Milojkovic, BR Dortland, TJ Ruigrok, R Maex, W De Graaf, AE Smit, F VanderWerf, CE Bakker, R Willemsen, T Ikeda, S Kakizawa, K Onodera, DL Nelson, E Mientjes, M Joosten, E De Schutter, BA Oostra, M Ito, CI De Zeeuw:
Deletion of FMR1 in Purkinje cells enhances parallel fiber LTD, enlarges spines, and attenuates cerebellar eyelid conditioning in Fragile X syndrome. Neuron 47:339-52 (2005)

E De Schutter, O Ekeberg, JH Kotaleski, P Achard, A Lansner:
Biophysically detailed modelling of microcircuits and beyond. Trends in neurosciences 28:562-9 (2005)

G Silberberg, S Grillner, FE LeBeau, R Maex, H Markram:
Synaptic pathways in neural microcircuits. Trends in neurosciences 28:541-51 (2005)

M Berends, R Maex, E De Schutter:
The effect of NMDA receptors on gain modulation. Neural computation 17:2531-47 (2005)

R Maex, E De Schutter:
Oscillations in the cerebellar cortex: a prediction of their frequency bands. Progress in brain research 148:181-8 (2005)

E. De Schutter:
Changes and Opportunities (editorial). Neuroinformatics 3:79-80 (2005)

E. De Schutter:
Computational Neuroscience: Trends in research 2005 (Guest editorial). Neurocomputing 65-66:1-3 (2005)


2004

T Szilágyi, E De Schutter:
Effects of variability in anatomical reconstruction techniques on models of synaptic integration by dendrites: a comparison of three Internet archives. The European journal of neuroscience 19:1257-66 (2004)

KG Claeys, P Dupont, L Cornette, S Sunaert, P Van Hecke, E De Schutter, GA Orban:
Color discrimination involves ventral and dorsal stream visual areas. Cerebral cortex (New York, N.Y. : 1991) 14:803-22 (2004)

E. De Schutter:
A look back (Editorial). Neuroinformatics 2: (2004)

H. Cornelis, E. De Schutter:
Neurospaces parameter handling. Neurocomputing 58-60:1079-1084 (2004)

M. Berends, R. Maex, E. De Schutter:
A detailed three-dimensional model of the cerebellar granular layer. Neurocomputing 58-60:587-592 (2004)

E. De Schutter:
Computational Neuroscience: Trends in research 2004 (Guest editorial). Neurocomputing 58-60:xix-xxi (2004)

V. Steuber, E. De Schutter and D. Jaeger:
Passive models of neurons in the deep cerebellar nuclei: the effect ofreconstruction errors. Neurocomputing 58-60:563-568 (2004)


2003

P Eckersley, GF Egan, S Amari, F Beltrame, R Bennett, JG Bjaalie, T Dalkara, E De Schutter, C Gonzalez, S Grillner, A Herz, KP Hoffmann, IP Jaaskelainen, SH Koslow, SY Lee, L Matthiessen, PL Miller, FM da Silva, M Novak, V Ravindranath, R Ritz, U Ruotsalainen, S Subramaniam, AW Toga, S Usui, J van Pelt, P Verschure, D Willshaw, A Wrobel, Y Tang:
Neuroscience data and tool sharing: a legal and policy framework for neuroinformatics. Neuroinformatics 1:149-65 (2003)

KG Claeys, GA Orban, P Dupont, S Sunaert, P Van Hecke, E De Schutter:
Involvement of multiple functionally distinct cerebellar regions in visual discrimination: a human functional imaging study. NeuroImage 20:840-54 (2003)

FJ Geurts, E De Schutter, S Dieudonne:
Unraveling the cerebellar cortex: cytology and cellular physiology of large-sized interneurons in the granular layer. Cerebellum (London, England) 2:290-9 (2003)

R Maex, E De Schutter:
Resonant synchronization in heterogeneous networks of inhibitory neurons. The Journal of neuroscience : the official journal of the Society for Neuroscience 23:10503-14 (2003)

KG Claeys, DT Lindsey, E De Schutter, GA Orban:
A higher order motion region in human inferior parietal lobule: evidence from fMRI. Neuron 40:631-42 (2003)

E. De Schutter:
Computational Neuroscience: Trends in Research 2003 (Guest editorial). Neurocomputing 52:xvii - xix (2003)

H. Cornelis, E. De Schutter:
Neurospaces: separating modeling and simulation. Neurocomputing 52:227-231 (2003)

S. Solinas, R. Maex, E. De Schutter:
Synchronization of Purkinje cell pairs along the parallel fiber axis: a model. Neurocomputing 52-54:97 - 102 (2003)

D. Theofilou, V. Steuber, E. De Schutter:
Novelty detection in a Kohonen like netwerk with a Long Term Depression learning rule. Neurocomputing 52-54:411 - 417 (2003)

G.A. Ascoli, E. De Schutter, D.N. Kennedy:
An Information Science Infrastructure for Neuroscience. Neuroinfomatics 1:1-2 (2003)


2002

RC Cannon, FW Howell, NH Goddard, E De Schutter:
Non-curated distributed databases for experimental data and models in neuroscience. Network (Bristol, England) 13:415-28 (2002)

S Amari, F Beltrame, JG Bjaalie, T Dalkara, E De Schutter, GF Egan, NH Goddard, C Gonzalez, S Grillner, A Herz, KP Hoffmann, I Jaaskelainen, SH Koslow, SY Lee, L Matthiessen, PL Miller, FM Da Silva, M Novak, V Ravindranath, R Ritz, U Ruotsalainen, V Sebestra, S Subramaniam, Y Tang, AW Toga, S Usui, J Van Pelt, P Verschure, D Willshaw, A Wrobel:
Neuroinformatics: the integration of shared databases and tools towards integrative neuroscience. Journal of integrative neuroscience 1:117-28 (2002)

F. Santamaria, D Jaeger, E De Schutter, JM Bower:
Modulatory effects of parallel fiber and molecular layer interneuron synaptic activity on purkinje cell responses to ascending segment input: a modeling study. Journal of computational neuroscience 13:217-35 (2002)

E De Schutter:
Cerebellar cortex: computation by extrasynaptic inhibition? Current biology : CB 12:R363-5 (2002)

A Volny-Luraghi, R Maex, B Vos, E De Schutter:
Peripheral stimuli excite coronal beams of Golgi cells in rat cerebellar cortex. Neuroscience 113:363-73 (2002)

FJ Geurts, E De Schutter, JP Timmermans:
Localization of 5-HT2A, 5-HT3, 5-HT5A and 5-HT7 receptor-like immunoreactivity in the rat cerebellum. Journal of chemical neuroanatomy 24:65-74 (2002)

V. Steuber, E. De Schutter:
Rank order decoding of temporal parallel fibre input patterns in a complex Purkinje cell model. Neurocomputing 44:183-188 (2002)


2001

RR Peeters, I Tindemans, E De Schutter, A Van der Linden:
Comparing BOLD fMRI signal changes in the awake and anesthetized rat during electrical forepaw stimulation. Magnetic resonance imaging 19:821-6 (2001)

E De Schutter, JG Bjaalie:
Coding in the granular layer of the cerebellum. Progress in brain research 130:279-96 (2001)

FJ Geurts, J Timmermans, R Shigemoto, E De Schutter:
Morphological and neurochemical differentiation of large granular layer interneurons in the adult rat cerebellum. Neuroscience 104:499-512 (2001)

V. Steuber, E. De Schutter:
Long-term depression and recognition of parallel fibre patterns in a multi-compartmental model of a cerebellar Purkinje cell. Neurocomputing 38:383-388 (2001)

P. Franck, R. Maex, E. De Schutter:
Synchronization between patches of local excitation in a cerebellar granular layer model. Neurocomputing 38:595-599 (2001)

N. Goddard, G. Hood, F. Howell, M. Hines, E. De Schutter:
NEOSIM: Portable large-scale plug and play modelling. Neurocomputing 38:1657-1661 (2001)

G. Bormann, F. Brosens, E. De Schutter:
Diffusion. In Computational Modeling of Genetic and Biochemical Networks. MIT Press, Boston -:189-224 (2001)


2000

R Maex, BP Vos, E De Schutter:
Weak common parallel fibre synapses explain the loose synchrony observed between rat cerebellar golgi cells. The Journal of physiology 523 Pt 1:175-92 (2000)

BP Vos, A Volny-Luraghi, R Maex, E De Schutter:
Precise spike timing of tactile-evoked cerebellar Golgi cell responses: a reflection of combined mossy fiber and parallel fiber activation? Progress in brain research 124:95-106 (2000)

E De Schutter, B Vos, R Maex:
The function of cerebellar Golgi cells revisited. Progress in brain research 124:81-93 (2000)

T.B. Leergaard, K.A. Lyngstad, J.H. Thompson, S. Taeymans, B.P. Vos, E. De Schutter, J.M. Bower, J.G. Bjaalie:
Rat somatosensory cerebro-ponto-cerebellar pathways: spatial relationships in the SI somatotopic map are preserved in a three-dimensional clustered pontine map. Journal of Comparative Neurology 422:1041-1036 (2000)

F.W. Howell, J. Dyrhfjeld-Johnsen, R. Maex, N. Goddard, E. De Schutter:
A large scale model of the cerebellar cortex using PGENESIS. Neurocomputing 32:1041-1036 (2000)

E. De Schutter, (editor):
Computational Neuroscience: Realistic Modeling for Experimentalists. CRC Press, Boca Raton -:368 (2000)

E. De Schutter, V. Steuber:
Modeling of neurons with active dendrites. Computational Neuroscience: Realistic Modeling for Experimentalists. E. De Schutter editor, CRC Press, Boca Raton -:233-257 (2000)


1999

BP Vos, M Wijnants, S Taeymans, E De Schutter:
Miniature carrier with six independently moveable electrodes for recording of multiple single-units in the cerebellar cortex of awake rats. Journal of neuroscience methods 94:19-26 (1999)

RR Peeters, M Verhoye, BP Vos, D Van Dyck, A Van Der Linden, E De Schutter:
A patchy horizontal organization of the somatosensory activation of the rat cerebellum demonstrated by functional MRI. The European journal of neuroscience 11:2720-30 (1999)

BP Vos, A Volny-Luraghi, E De Schutter:
Cerebellar Golgi cells in the rat: receptive fields and timing of responses to facial stimulation. The European journal of neuroscience 11:2621-34 (1999)

E De Schutter:
Using realistic models to study synaptic integration in cerebellar Purkinje cells. Reviews in the neurosciences 10:233-45 (1999)

G Gundappa-Sulur, E De Schutter, JM Bower:
Ascending granule cell axon: an important component of cerebellar cortical circuitry. The Journal of comparative neurology 408:580-96 (1999)

BP Vos, R Maex, A Volny-Luraghi, E De Schutter:
Parallel fibers synchronize spontaneous activity in cerebellar Golgi cells. The Journal of neuroscience : the official journal of the Society for Neuroscience 19:RC6 (1999)

L. Cornette, P. Dupont, H. Peuskens, G. Bormans, K. Claeys, E. De Schutter, L. Mortelmans, G.A. Orban:
Rate dependence of task-related cerebral activations: a PET-study. Human Brain Mapping -:- (1999)

R. Maex, E. De Schutter:
An optimal connection radius for long-range synchronization. In ICANN99: 9th International Conference on Artificial Neural Networks in Edinburgh, United Kingdom IEE Conference Proceeding 470:557-562 (1999)

R.M. Eichler West, E. De Schutter, G.L. Wilcox:
Using evolutionary algorithms to search for control parameters in a nonlinear partial differential equation. Evolutionary Algorithms 111:33-64 (1999)

E. De Schutter:
The charm of the single neuron (book review). Nature 398:678 (1999)


1998

E De Schutter:
Dendritic voltage and calcium-gated channels amplify the variability of postsynaptic responses in a Purkinje cell model. Journal of neurophysiology 80:504-19 (1998)

R Maex, E De Schutter:
Synchronization of golgi and granule cell firing in a detailed network model of the cerebellar granule cell layer. Journal of neurophysiology 80:2521-37 (1998)

R. Maex, E. De Schutter:
The critical synaptic number for rhythmogenesis and synchronization in a network model of the cerebellar granular layer. ICANN 98:361-366 (1998)

E. De Schutter:
Detailed model of ryanodine receptor-mediated calcium release in Purkinje cells. Computational Neuroscience: Trends in research 1998:161-166 (1998)

E. De Schutter, P. Smolen:
Calcium dynamics in large neuronal models. in Methods in neuronal modeling. From ions to networks (2nd edition), C. Koch and I. Segev editors 1998:211-250 (1998)

E. De Schutter, D. Beeman:
Speeding up GENESIS simulations. The Book of GENESIS: Exploring realistic neural models with the GEneral Neural SImulation System (2nd edition), J.M. Bower and D. Beeman editors 1998:329-347 (1998)


1997

E De Schutter:
A new functional role for cerebellar long-term depression. Progress in brain research 114:529-42 (1997)

D. Jaeger, E. De Schutter:
Anatomical structure alone can not predict function. Behavioral and Brain Sciences 20:252 (1997)

D. Jaeger, E. De Schutter, J.M. Bower:
The role of synaptic and voltage-gated currents in the control of Purkinje cell spiking: a modeling study. The Journal of Neuroscience 17:91-106 (1997)

D. Beeman, J.M. Bower, E. De Schutter, E.N. Efthimiadis, N. Goddard, J. Leigh:
The GENESIS simulator-based neuronal database. Neuroinformatics: An Overview of the Human Brain Project, S.H. Koslow and M. F. Huerta editors 1997:57-81 (1997)


1996

E De Schutter, R Maex:
The cerebellum: cortical processing and theory. Current opinion in neurobiology 6:759-64 (1996)

E. De Schutter:
One cannot build theories of cerebellar function on shaky foundations: induction properties of long-term depression have to be taken into account. Behavioral and Brain Sciences 19:440-441 (1996)

E. De Schutter:
Cerebellar long-term depression: Reply. Trends in Neurosciences 19:12 (1996)


1995

E De Schutter:
Cerebellar long-term depression might normalize excitation of Purkinje cells: a hypothesis. Trends in neurosciences 18:291-5 (1995)

E. De Schutter:
Dendritic calcium channels amplify the variability of postsynaptic responses. CSCC Annual Report 1994-1995 1994-1995:- (1995)

E. De Schutter:
Large-scale neuronal theories of the brain (book review). Trends in Neurosciences 18:201 (1995)

L. Leigh, C.A. Vasilakis, T.A. DeFanti, R. Grossman, C. Assad, B. Rasnow, A. Protopappas, E. De Schutter, J.M. Bower:
Virtual reality in computational neuroscience. Virtual Reality Applications, R.A. Earnshaw, J.A. Vince and H. Jones editors, Academic Press, London. -:293-306 (1995)

F. Nadim, Ø. Olsen, E. De Schutter, R.L. Calabrese:
Modeling the Leech Heartbeat Elemental Oscillator: I. Interactions of Intrinsic and Synaptic Currents. Journal of Computational Neuroscience 2:215-235 (1995)


1994

E De Schutter, JM Bower:
Simulated responses of cerebellar Purkinje cells are independent of the dendritic location of granule cell synaptic inputs. Proceedings of the National Academy of Sciences of the United States of America 91:4736-40 (1994)

E De Schutter, JM Bower:
An active membrane model of the cerebellar Purkinje cell. I. Simulation of current clamps in slice. Journal of neurophysiology 71:375-400 (1994)

E De Schutter, JM Bower:
An active membrane model of the cerebellar Purkinje cell II. Simulation of synaptic responses. Journal of neurophysiology 71:401-19 (1994)

C Staub, E De Schutter, T Knöpfel:
Voltage-imaging and simulation of effects of voltage- and agonist-activated conductances on soma-dendritic voltage coupling in cerebellar Purkinje cells. Journal of computational neuroscience 1:301-11 (1994)

E de Schutter:
Modelling the cerebellar Purkinje cell: experiments in computo. Progress in brain research 102:427-41 (1994)

E. De Schutter, J.M. Bower:
Modeling synaptic integration in a complex neuron on the Delta. CSCC Annual Report 1994 1994:18-19 (1994)


1993

E De Schutter, JD Angstadt, RL Calabrese:
A model of graded synaptic transmission for use in dynamic network simulations. Journal of neurophysiology 69:1225-35 (1993)

E. De Schutter:
Nodus, a user friendly neuron simulator for Macintosh computers. Neural Systems: Analysis and Modeling, F.H. Eeckman editor, Kluwer Academic, Norwell MA. -:113-119 (1993)

E. De Schutter, J.M. Bower:
Sensitivity of synaptic plasticity to the Ca2+-permeability of NMDA-channels: a model of long term potentiation in hippocampal neurons. Neural Computation 5:681-694 (1993)

E. De Schutter, J.M. Bower:
Integration of synaptic inputs in a model of the Purkinje cell. Computation and Neural Systems, F.H. Eeckman and J.M. Bower editors, Kluwer Academic, Norwell MA -:355-362 (1993)

E. De Schutter, T.W. Simon, J.D. Angstadt and R.L. Calabrese:
Modeling a neural oscillator that paces heartbeat in the medicinal leech. American Zoologist 33:16-28 (1993)

D. Jaeger, E. De Schutter, J.M. Bower:
Prolonged activation with brief synaptic inputs in the Purkinje cell: intracellular recording and compartmental modeling. Computation and Neural Systems, F.H. Eeckman and J.M. Bower editors, Kluwer Academic, Norwell MA -:343-347 (1993)

J. Leigh, E. De Schutter, M. Lee, J.M. Bower, T.A. DeFanti:
Realistic modeling of brain structures with remote interaction between simulations of an inferior olivary neuron and a cerebellar Purkinje cell. High Performance Computing Symposium 1993, Grand Challenges in Computer Simulation. A. Tentner, editor, Society for Computer Simulations. -:248-254 (1993)


1992

E. De Schutter:
A consumer guide to neuronal modeling software. Trends in Neuroscience 15:462-464 (1992)

E. De Schutter, J.M. Bower:
Purkinje cell simulation on the Intel Touchstone Delta with GENESIS. Proceedings of the Grand Challenge Computing Fair, T. Mihaly and P. Messina editors, CCSF Publication, Caltech, Pasadena CA. -:268-279 (1992)

R.L. Calabrese, E. De Schutter:
Motor pattern generating networks in invertebrates: modeling our way toward understanding. Trends in Neurosciences 15:439-445 (1992)


1989

E. De Schutter:
Computer software for development and simulation of compartmental models of neurons. Computers in Biology and Medicine 19:71-81 (1989)


1986

E. De Schutter:
Alternative equations for the molluscan ion currents described by Connor and Stevens. Brain Research 382:134-138 (1986)


1985

E. De Schutter:
User acceptance of computer systems. Journal of the Royal Society of Medicine 78:86 (1985)