[Comp-neuro] Sharing analysis algorithms

Raphael Ritz raphael.ritz at incf.org
Wed Aug 20 13:48:38 CEST 2008


Michael Schmuker wrote:
> A. David Redish wrote:
>   
>> I suggest that we need a method for sharing analytical algorithms as
>> well as computational models.  
>>     
> There are a couple of initiatives emerging with this goal.
>
> a ) The neural ensemble: http://www.neuralensemble.org/
> It has several projects, most notably PyNN, "a Python package for 
> simulator-independent specification of neuronal network models". It is 
> rapidly growing and already in widespread use.
> There is also NeuroTools, a python package for data analysis from 
> simulations.
>
> b) The find toolbox: http://find.bccn.uni-freiburg.de/
> "A Matlab-based, open-source analysis toolbox for multiple-neuron 
> recordings and network simulations." 
>
> I'm sure there are many more similar approaches; any suggestions are 
> appreciated :)
>   
Indeed.

  http://software.incf.net/

provides a place where people are welcome to
publish any neuroscience-related code they
are willing to share.

Raphael


> Cheers,
>
> Michael
>
>   



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